論文 - 墨　智成

1. A neural network model that generates salt concentration memory-dependent chemotaxis in Caenorhabditis elegans

   Masakatsu Hironaka, Tomonari Sumi，elife，14巻，(頁 RP104456-1 ～ RP104456-42)，2025年02月

   

2. Mechanism of polymer molecular weight-dependent suppression and promotion of liquid-liquid phase separation of a protein solution by the addition of polymer

   Yoshihiro Osaka, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga, Hiroshi Imamura, Tsuyoshi Shirai, Yasuhiro Isogai，The Journal of Chemical Physics，162巻，(頁 051101-1 ～ 051101-8)，2025年02月

   

3. The nature of the hydrophobic interaction varies as the solute size increases from methane's to C60's

   Hidefumi Naito, Tomonari Sumi, Kenichiro Koga，The Journal of Chemical Physics，161巻，(頁 214501-1 ～ 214501-15)，2024年12月

   

4. Vaccine and antiviral drug promise for preventing post-acute sequelae of COVID-19, and their combination for its treatment

   Tomonari Sumi, Kouji Harada，Frontiers in Immunology，15巻，(頁 1329162-1. ～ 1329162-20.)，2024年08月

   

5. Pair Potential between Poloxamer 407 Micelles in 14 wt% Aqueous Solution Clarifying the So-Gel-Sol Transition by Temperature Rise

   Takeshi Morita, Yusuke Torii, Hiroshi Imamura, Teruki Kadota, Fumie Sakuma, Kenjirou Higashi, Tomonari Sumi，The Journal of Physical Chemistry Letters，15巻，31号，(頁 7909 ～ 7915)，2024年07月

   

6. How do water-mediated interactions and osmotic second virial coefficients vary with particle size?

   Hidefumi Naito, Tomonari Sumi, Kenichiro Koga，Faraday Discussions，249巻，(頁 440 ～ 452)，2024年06月

   

7. Solvation free energies of alcohols in water: temperature and pressure dependences

   Aoi Taira, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga，Physical Chemistry Chemical Physics，25巻，45号，(頁 31107 ～ 31117)，2023年10月

   

8. Molecular mechanism of the common and opposing co-solvent effects of fluorinated alcohol and urea on a coiled coil protein

   Noa Nakata, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga, Takeshi Morita, Hiroshi Imamura，Protein Science，32巻，10号，(頁 e4763-1 ～ e4763-15)，2023年08月

   

9. Muscarinic acetylcholine receptor-dependent and NMDA receptor-dependent LTP and LTD share the common AMPAR trafficking pathway

   Tomonari Sumi, Kouji Harada，iScience，26巻，3号，(頁 106133-1 ～ 106133-24)，2023年03月

   

10. Immune response to SARS-CoV-2 in severe disease and long COVID-19

    Tomonari Sumi, Kouji Harada，iScience ，25巻，8号，(頁 104723-1 ～ 104723-19)，2022年08月

    

11. Improvement of Protein Solubility in Macromolecular Crowding during Myoglobin Evolution

    Yasuhiro Isogai, Hiroshi Imamura, Tomonari Sumi, Tsuyoshi Shirai，Biochemistry，61巻，15号，(頁 1543 ～ 1547)，2022年06月

    

12. Osmotic second virial coefficients for hydrophobic interactions as a function of solute size

    Hidefumi Naito, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga，The Journal of Chemical Physics，156巻，22号，(頁 221104-1 ～ 221104-6)，2022年06月

    

13. Kinetics of the ancestral carbon metabolism pathways in deep-branching bacteria and archaea

    Tomonari Sumi, Kouji Harada，Communications Chemistry，4巻，1号，(頁 149-1 ～ 149-9)，2021年12月

    

14. Water-mediated interactions destabilize proteins

    Tomonari Sumi, Hiroshi Imamura，Protein Science，30巻，10号，(頁 2132 ～ 2143)，2021年08月

    

15. Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals

    Yasuhiro Isogai, Hiroshi Imamura, Setsu Nakae, Tomonari Sumi, Ken-ichi Takahashi, Tsuyoshi Shirai，iScience，24巻，8号，(頁 102920-1 ～ 102920-22)，2021年08月

    

16. Ion Size Dependences of the Salting-Out Effect: Reversed Order of Sodium and Lithium Ions

    Hiroyuki Katsuto, Ryuichi Okamoto, Tomonari Sumi, Kenichiro Koga，The Journal of Physical Chemistry B，125巻，23号，(頁 6296 ～ 6305)，2021年06月

    

17. A mathematical study on the effects of a combination of an immune checkpoint inhibitor and a mutagen for anti-HIV-1 therapy

    Kouji Harada, Tomonari Sumi，Artificial Life and Robotics，26巻，2号，(頁 210 ～ 215)，2021年05月

    

18. Unveiling the Interaction Potential Surface between Drug-Entrapped Polymeric Micelles Clarifying the High Drug Nanocarrier Efficiency

    Takeshi Morita, Sayaka Mukaide, Ziqiao Chen, Kenjirou Higashi, Hiroshi Imamura, Kunikazu Moribe, Tomonari Sumi，Nano Letters，21巻，3号，(頁 1303 ～ 1310)，2021年02月

    

19. Two different regimes in alcohol-induced coil-helix transition: effects of 2,2,2-trifluoroethanol on proteins being either independent of or enhanced by solvent structural fluctuations

    Hiroyo Ohgi, Hiroshi Imamura, Tomonari Sumi, Keiko Nishikawa, Yoshikata Koga, Peter Westh, Takeshi Morita，Physical Chemistry Chemical Physics，23巻，10号，(頁 5760 ～ 5772)，2021年01月

    

20. Mechanism underlying hippocampal long-term potentiation and depression based on competition between endocytosis and exocytosis of AMPA receptors

    Tomonari Sumi, Kouji Harada，Scientific Reports，10巻，(頁 14711-1 ～ 14711-14)，2020年12月