Papers - Sumi Tomonari

21. An Improved Model-potential-free Analysis of the Structure Factor Obtained from a Small-angle Scattering: Acquisitions of the Pair Distribution Function and the Pair Potential

    Ken-ichi Amano, Ryosuke Sawazumi, Hiroshi Imamura, Tomonari Sumi, Kota Hashimoto, Kazuhiro Fukami, Haru Kitaoka, Naoya Nishi, Tetsuo Sakka，Chemistry Letters，vol.49，(9)，(p.1017 ～ 1021)，2020.09

    

22. Is F1-ATPase a Rotary Motor with Nearly 100% Efficiency? Quantitative Analysis of Chemomechanical Coupling and Mechanical Slip

    Tomonari Sumi, Stefan Klumpp，Nano Letters，vol.19，(5)，(p.3370 ～ 3378)，2019.05

    

23. Interaction potential surface between Raman scattering enhancing nanoparticles conjugated with a functional copolymer

    Takeshi Morita, Yuki Ogawa, Hiroshi Imamura, Kouki Ookubo, Nobuo Uehara, Tomonari Sumi，Phys. Chem. Chem. Phys.，vol.21，(31)，(p.16889 ～ 16894)，2019.05

    

24. Theoretical analysis on thermodynamic stability of chignolin

    Tomonari Sumi, Kenichiro Koga，Scientific Reports，vol.9，(p.5186-1 ～ 5186-9)，2019.03

    

25. Tracing whale myoglobin evolution by resurrecting ancient proteins

    Yasuhiro Isogai, Hiroshi Imamura, Setsu Nakae, Tomonari Sumi, Ken-ichi Takahashi, Taro Nakagawa, Antonio Tsuneshige, Tsuyoshi Shirai，Scientific Reports，vol.8，(p.16883-1 ～ 16883-14)，2018.11

    

26. Application of reference-modified density functional theory: Temperature and pressure dependences of solvation free energy

    Tomonari Sumi, Yutaka Maruyama, Ayori Mitsutake, Kenji Mochizuki, Kenichiro Koga，JOURNAL OF COMPUTATIONAL CHEMISTRY，vol.39，(4)，(p.202 ～ 216)，2018.02

    

27. Numerical calculation on a two-step subdiffusion behavior of lateral protein movement in plasma membranes

    Tomonari Sumi, Atsushi Okumoto, Hitoshi Goto, Hideo Sekino，PHYSICAL REVIEW E，vol.96，(4)，(p.042410-1 ～ 042410-10)，2017.10

    

28. Myosin V: Chemomechanical-coupling ratchet with load-induced mechanical slip

    Tomonari Sumi，Scientific Reports，vol.7，(p.13489-1 ～ 13489-12)，2017.10

    

29. Influence of co-non-solvency on hydrophobic molecules driven by excluded volume effect

    Kenji Mochizuki, Tomonari Sumi, Kenichiro Koga，PHYSICAL CHEMISTRY CHEMICAL PHYSICS，vol.19，(35)，(p.23915 ～ 23918)，2017.09

    

30. Design principles governing chemomechanical coupling of kinesin

    Tomonari Sumi，Scientific Reports，vol.7，(p.1163-1 ～ 1163-13)，2017.04

    

31. Hydrophobic Polymer Chain in Water That Undergoes a Coil-to-Globule Transition Near Room Temperature

    I. Hatano, K. Mochizuki, T. Sumi, K. Koga，JOURNAL OF PHYSICAL CHEMISTRY B，vol.120，(47)，(p.12127 ～ 12134)，2016.12

    

32. Interaction Potential between Biological Sensing Nanoparticles Determined by Combining Small-Angle X-ray Scattering and Model-Potential-Free Liquid Theory

    Takeshi Morita, Nobuo Uehara, Kenji Kuwahata, Hiroshi Imamura, Takeshi Shimada, Kouki Ookubo, Maki Fujita, Tomonari Sumi，J. Phys. Chem. C，vol.120，(44)，(p.25564 ～ 25571)，2016.11

    

33. A reference-modified density functional theory: An application to solvation free-energy calculations for a Lennard-Jones solution

    Tomonari Sumi, Yutaka Maruyama, Ayori Mitsutake, Kenichiro Koga，THE JOURNAL OF CHEMICAL PHYSICS，vol.144，(22)，(p.224104-1 ～ 224104-15)，2016.06

    

34. Liquid-iquid phase separation of N-isopropylpropionamide aqueous solutions above the lower critical solution temperature

    Kenji Mochizuki, Tomonari Sumi, Kenichiro Koga，Scientific Reports，vol.6，(p.24657-1 ～ 24657-10)，2016.04

    

35. Mean-Field Approximation to the Hydrophobic Hydration in the Liquid-Vapor Interface of Water

    Kiharu Abe, Tomonari Sumi, Kenichiro Koga，J. Phys. Chem. B，vol.120，(8)，(p.2012 ～ 2019)，2016.03

    

36. Driving forces for the pressure-induced aggregation of poly(N-isopropylacrylamide) in water

    Kenji Mochizuki, Tomonari Sumi, Kenichiro Koga，PHYSICAL CHEMISTRY CHEMICAL PHYSICS，vol.18，(6)，(p.4697 ～ 4703)，2016.02

    

37. Investigation of a virtual nested two-dimensional lattice model for representing the diffusive motion of a transmembrane protein in cell membrane

    Atsushi OKUMOTO, Tomonari SUMI, Hideo SEKINO, Hitoshi GOTO，Journal of Computer Chemistry, Japan，vol.15，(6)，(p.229 ～ 231)，2016

    

38. Erratum: "A solvation-Free-Energy Functional: A Reference-Modified Density Functional Formulation" [J. Comput. Chem. 2015, 36, 1359-1369]

    Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama，J. Comput. Chem.，vol.36，(26)，(p.2009 ～ 2011)，2015.10

    

39. A solvation-free-energy functional: A reference-modified density functional formulation

    Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama，JOURNAL OF COMPUTATIONAL CHEMISTRY，vol.36，(18)，(p.1359 ～ 1369)，2015.07

    

40. A model-free method for extracting interaction potential between protein molecules using small-angle X-ray scattering

    Tomonari Sumi, Hiroshi Imamura, Takeshi Morita, Keiko Nishikawa，JOURNAL OF MOLECULAR LIQUIDS，vol.200，(p.42 ～ 46)，2014.12